BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004C05SP1|AL425239
(882 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1411 1740 0.0
>3x_Contig1411
Length = 7271
Score = 1740 bits (877), Expect = 0.0
Identities = 880/882 (99%)
Strand = Plus / Plus
Query: 1 catggcccangaagaattcaggagatgggcttctggattgcaacagcggatcaaccaatt 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4040 catggcccatgaagaattcaggagatgggcttctggattgcaacagcggatcaaccaatt 4099
Query: 61 gttcaagactagtcagaaaattttgcaattgtgaagacgagtaataactctttttggatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4100 gttcaagactagtcagaaaattttgcaattgtgaagacgagtaataactctttttggatg 4159
Query: 121 tggttttaggaataaaccgatcgttcccattgccgccaatatttttagtagaactgaacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4160 tggttttaggaataaaccgatcgttcccattgccgccaatatttttagtagaactgaacg 4219
Query: 181 acagtttaggtttatgtgacaaagaacccagaaaattcacaccaaaatcgtccctgagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4220 acagtttaggtttatgtgacaaagaacccagaaaattcacaccaaaatcgtccctgagtt 4279
Query: 241 tagtttcacgggtcttgtttatcattggagcaacaaatcaatggaaggcacccaatttac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4280 tagtttcacgggtcttgtttatcattggagcaacaaatcaatggaaggcacccaatttac 4339
Query: 301 ctctctgtgttgtctctttttgttttcttttaaatgtggtttgtttaagctttaatcctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4340 ctctctgtgttgtctctttttgttttcttttaaatgtggtttgtttaagctttaatcctt 4399
Query: 361 taaactcgatgattttaaagataagtagcgacagaataatgatgaaagcagaaatgttat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4400 taaactcgatgattttaaagataagtagcgacagaataatgatgaaagcagaaatgttat 4459
Query: 421 agatagcaatagcgattttatgaaacggatggtcgtaccacggtacgttcaaatagctcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4460 agatagcaatagcgattttatgaaacggatggtcgtaccacggtacgttcaaatagctcg 4519
Query: 481 aaagagaccgtgatagtgtaagccagtagaggatctgaacagatccggtgtctttagctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4520 aaagagaccgtgatagtgtaagccagtagaggatctgaacagatccggtgtctttagctg 4579
Query: 541 ggacaatcaaaagaatgtgtcaaaaaactcattacatagatttgcatatgtagtctatga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4580 ggacaatcaaaagaatgtgtcaaaaaactcattacatagatttgcatatgtagtctatga 4639
Query: 601 cagcgcactgtgtcacaaggtttatatacttgtgacatctttcggatgagatgcgtacaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4640 cagcgcactgtgtcacaaggtttatatacttgtgacatctttcggatgagatgcgtacaa 4699
Query: 661 aagtcttgccttggcattgtgtacagagaagtattgcgaagacggttcggtagcgaagag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4700 aagtcttgccttggcattgtgtacagagaagtattgcgaagacggttcggtagcgaagag 4759
Query: 721 taatgttttgtgggtatttatgtcaggatgacgcagttcatgtagatgaagtacattcat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4760 taatgttttgtgggtatttatgtcaggatgacgcagttcatgtagatgaagtacattcat 4819
Query: 781 gcatctgtttctgtactgaagcaagtgggttggagtgcagctagtattaggttcggagaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4820 gcatctgtttctgtactgaagcaagtgggttggagtgcagctagtattaggttcggagaa 4879
Query: 841 gtaaaggaatttagtktcctcttttatggatttaattggctt 882
||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4880 gtaaaggaatttagtgtcctcttttatggatttaattggctt 4921
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6159
Number of Sequences: 1807
Number of extensions: 6159
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 882
length of database: 10,358,551
effective HSP length: 16
effective length of query: 866
effective length of database: 10,329,639
effective search space: 8945467374
effective search space used: 8945467374
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)